9629609.br
NCBI Conserved Domain search results:
393) 12..378 1..372 Herpes_glycop, Herpesvirus glycoprotein M. The herpesvirus glycoprotein M (gM) is an...
gi|9629609|ref|NP_| glycoprotein M [murid herpesvirus
20proteins
Virion membrane glycoprotein M
383 letters
BLASTP 2.2.3 [Apr-24-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",
Nucleic Acids Res. 25:.
Query= gi|9629609|ref|NP_| glycoprotein M [murid herpesvirus
(383 letters)
Database: dsDNA virus proteins
11,439 3,586,242 total letters
Sequences producing significant alignments:
(bits) Value
gi|9629609|ref|NP_| (NC_001826) glycoprotein M [murid he...
gi||ref|NP_| (NC_003401) glycoprotein M [Macaca ...
gi||ref|NP_| (NC_003409) ORF 39; glycoprotein M ...
gi|9625995|ref|NP_| (NC_001350) integral membrane protei...
gi|9631231|ref|NP_| (NC_001987) orf 39 [Ateline herpesvi...
gi||ref|NP_| (NC_002665) glycoprotein M [Bovine ...
gi|9628042|ref|NP_| (NC_001650) glycoprotein M [Equine h...
gi||ref|NP_| (NC_002531) integral membrane prote...
gi|9625633|ref|NP_| (NC_001345) integral membrane protei...
gi|9628794|ref|NP_| (NC_001716) glycoprotein M [Human he...
gi|9633141|ref|NP_| (NC_000898) glycoprotein M [Human he...
gi|9628374|ref|NP_| (NC_001664) integral membrane protei...
gi|9845387|ref|NP_| (NC_002512) pR100 [Rat cytomegalovirus]
gi||ref|NP_| (NC_002794) T100 [Tupaia herpesvirus]
gi|9625786|ref|NP_| (NC_001347) glycoprotein M [human he...
gi|9626789|ref|NP_| (NC_001491) membrane protein [Equine...
gi|9629780|ref|NP_| (NC_ [Equine herpesvirus 4]
gi|9625925|ref|NP_| (NC_001348) virion membrane glycopro...
gi||ref|NP_| (NC_002686) unknown [Cercopithecine...
gi||ref|NP_| (NC_003521) envelope glycoprotein U...
gi|9635045|ref|NP_| (NC_002229) UL10 [Gallid herpesvirus 2]
gi||ref|NP_| (NC_002577) glycoprotein M [Gallid ...
gi||ref|NP_| (NC_002641) UL10 virion membrane gl...
gi|9629865|ref|NP_| (NC_001847) glycoprotein M [Bovine h...
gi|9629279|ref|NP_| (NC_001798) virion glycoprotein M [h...
gi|9629390|ref|NP_| (NC_001806) virion glycoprotein M [h...
gi||ref|NP_| (NC_003027) LSDV128 CD47-like prote...
gi|9634611|ref|NP_| (NC_002171) start codon is not ident...
gi||ref|NP_| (NC_003225) wsv484 [shrimp white sp...
gi|9630097|ref|NP_| (NC_001876) DNA polymerase [Bovine a...
gi|9964444|ref|NP_| (NC_002520) putative ATP-binding cas...
gi||ref|NP_| (NC_004002) CD47-like protein [Shee...
gi|9634852|ref|NP_| (NC_002188) ORF FPV182 Phosphorylate...
gi|9634774|ref|NP_| (NC_002188) ORF FPV104 hypothetical ...
gi|9631704|ref|NP_| (NC_000852) A135L [Paramecium bursar...
gi||ref|NP_| (NC_003521) US2 [chimpanzee cytomeg...
gi||ref|NP_| (NC_003401) unknown [Macaca mulatta...
gi|9631432|ref|NP_| (NC_001993) ORF MSV233 hypothetical ...
gi||ref|NP_| (NC_003529) occlusion-derived virus...
gi|9964479|ref|NP_| (NC_002520) Hypothetical protein [Am...
gi||ref|NP_| (NC_004002) G protein-coupled chemo...
gi|9631502|ref|NP_| (NC_001993) ORF MSV067 putative mRNA...
gi|9964458|ref|NP_| (NC_002520) Hypothetical protein [Am...
# >gi|9629609|ref|NP_| (NC_001826) glycoprotein M [murid herpesvirus 4]
Length = 383
752 bits (1941), Expect = 0.0
Identities = 383/383 (100%), Positives = 383/383 (100%)
# Query: 1
MPALKVPQLKKLEPSRSDSFLLKSWTNLLALLTLLFVTSSTVPILASFRGVGFPCYFVNL 60
MPALKVPQLKKLEPSRSDSFLLKSWTNLLALLTLLFVTSSTVPILASFRGVGFPCYFVNL
# Sbjct: 1
MPALKVPQLKKLEPSRSDSFLLKSWTNLLALLTLLFVTSSTVPILASFRGVGFPCYFVNL 60
# Query: 61
VDYSTLNLTVRNSAKHLTPTLFLEGPEMFVYIVWSFLTEAINIIYFIFGAVTVYRLKKIF 120
VDYSTLNLTVRNSAKHLTPTLFLEGPEMFVYIVWSFLTEAINIIYFIFGAVTVYRLKKIF
# Sbjct: 61
VDYSTLNLTVRNSAKHLTPTLFLEGPEMFVYIVWSFLTEAINIIYFIFGAVTVYRLKKIF 120
# Query: 121 MPSLNAIQVWLTLIGGHSTLYLSIARLWTLQLFVHVLSFKQIFLAAFVYLFHFMLSYVHV 180
MPSLNAIQVWLTLIGGHSTLYLSIARLWTLQLFVHVLSFKQIFLAAFVYLFHFMLSYVHV
# Sbjct: 121 MPSLNAIQVWLTLIGGHSTLYLSIARLWTLQLFVHVLSFKQIFLAAFVYLFHFMLSYVHV 180
# Query: 181 HVFISRYVPQWQANDMEQKIPEGSSLEKLVLFYRPILANIQMSLLALEMLVFSLSVMMAV 240
HVFISRYVPQWQANDMEQKIPEGSSLEKLVLFYRPILANIQMSLLALEMLVFSLSVMMAV
# Sbjct: 181 HVFISRYVPQWQANDMEQKIPEGSSLEKLVLFYRPILANIQMSLLALEMLVFSLSVMMAV 240
# Query: 241 CNSFYILVSDAVFGAVNLFLIISLVWHIGAEVFLAKYLRHHVGFYIGLFVAYVIMLLPVI 300
CNSFYILVSDAVFGAVNLFLIISLVWHIGAEVFLAKYLRHHVGFYIGLFVAYVIMLLPVI
# Sbjct: 241 CNSFYILVSDAVFGAVNLFLIISLVWHIGAEVFLAKYLRHHVGFYIGLFVAYVIMLLPVI 300
# Query: 301 RYDAIFVTSRLHKPITINMTIIPIICLIIIVVRIIRLRSQTSTKVTYKKLGISGAMEAQP 360
RYDAIFVTSRLHKPITINMTIIPIICLIIIVVRIIRLRSQTSTKVTYKKLGISGAMEAQP
# Sbjct: 301 RYDAIFVTSRLHKPITINMTIIPIICLIIIVVRIIRLRSQTSTKVTYKKLGISGAMEAQP 360
# Query: 361 FQSIPQPPRAKYTDLETESEDEL 383
FQSIPQPPRAKYTDLETESEDEL
# Sbjct: 361 FQSIPQPPRAKYTDLETESEDEL 383
# >gi||ref|NP_| (NC_003401) glycoprotein M [Macaca mulatta rhadinovirus]
Length = 378
392 bits (1006), Expect = e-110
Identities = 181/366 (49%), Positives = 262/366 (71%), Gaps = 13/366 (3%)
# Query: 15
SRSDSFLLKSWTNLLALLTLLFVTSSTVPILASFRGVGFPCYFVNLVDYSTLNLTVRNSA 74
SRSDSF+L SW
LL +L L+F+ S+ VP+ A+F G+GFPCYF
LV+YS LNLTVR+SA
# Sbjct: 4
SRSDSFILSSWVKLLVILGLMFIMSAVVPLTATFPGLGFPCYFNTLVNYSALNLTVRSSA 63
# Query: 75
KHLTPTLFLEGPEMFVYIVWSFLTEAINIIYFIFGAVTVYRLKKIFMPSLNAIQVWLTLI 134
KHLTPTLFLE PEMFVYI W+FL +
++ ++Q W+ LI
# Sbjct: 64
KHLTPTLFLEAPEMFVYISWAFLVDGYLLCYYAWAILAIFKAKRVHATTMTSLQTWIVLI 123
# Query: 135 GGHSTLYLSIARLWTLQLFVHVLSFKQIFLAAFVYLFHFMLSYVHVHVFISRYVPQWQAN 194
G HS +++SI RLWT+QLF+HVLS+K I LA+FVY
# Sbjct: 124 GSHSVVFMSILRLWTIQLFIHVLSYKHILLASFVYCIHFCLSFTHVQAMISCNSATWSLR 183
# Query: 195 DMEQKIPEGSSLEKLVLFYRPILANIQMSLLALEMLVFSLSVMMAVCNSFYILVSDAVFG 254
+EQ+IPE S L+ L+ + +PI AN+ +SL+A+EMLVFSL
MMA+ NSFY+LVSD VFG
# Sbjct: 184 VLEQQIPENSLLDTLLRYGKPIGANLYLSLIAMEMLVFSLGTMMAIGNSFYMLVSDIVFG 243
# Query: 255 AVNLFLIISLVWHIGAEVFLAKYLRHHVGFYIGLFVAYVIMLLPVIRYDAIFVTSRLHKP 314
++NLF ++++ W+I
E+FL KYL+H +GFY+G+FV+Y+I+LLPV+RYD +F+++ LHK
# Sbjct: 244 SINLFFVLTIAWYINTELFLVKYLKHQIGFYVGVFVSYLILLLPVVRYDKVFISASLHKV 303
# Query: 315 ITINMTIIPIICLIIIVVRIIRLRSQTSTKVTYKKLGISGAMEAQPFQSIPQPPRAKYTD 374
I +N+++IPI C++ I++RIIR
+PQ P+ K T
# Sbjct: 304 IAVNISMIPITCILAIILRIIRNDWKWCAK-------------SPEYAPLPQGPKEKTTK 350
# Query: 375 LETESE 380
# Sbjct: 351 VKYSPE 356
# >gi||ref|NP_| (NC_003409) ORF 39; glycoprotein M gM EBV BBRF3
Please note that the start position for this ORF is
incorrectly given as 58,976 in Table 1 of the Russo et
al. paper. [Human herpesvirus 8]
Length = 400
376 bits (965), Expect = e-105
Identities = 179/375 (47%), Positives = 257/375 (67%), Gaps = 9/375 (2%)
# Query: 12
LEPSRSDSFLLKSWTNLLALLTLLFVTSSTVPILASFRGVGFPCYFVNLVDYSTLNLTVR 71
S+SD FL+ SW
++++ S+ VP+ A++ G+GFPCYF NLV+YS LNLTVR
# Sbjct: 1
MRASKSDRFLMSSWVKLLFVAVIMYICSAVVPMAATYEGLGFPCYFNNLVNYSALNLTVR 60
# Query: 72
NSAKHLTPTLFLEGPEMFVYIVWSFLTEAINIIYFIFGAVTVYRLKKIFMPSLNAIQVWL 131
NSAKHLTPTLFLE PEM VYI W+F+ + I I+Y+
AV VYR K +
# Sbjct: 61
NSAKHLTPTLFLEKPEMLVYIFWTFIVDGIAIVYYCLAAVAVYRAKHVHATTMMSMQSWI 120
# Query: 132 TLIGGHSTLYLSIARLWTLQLFVHVLSFKQIFLAAFVYLFHFMLSYVHVHVFISRYVPQW 191
L+G HS LY++I R+W++QLF+HVLS+K + +AAFVY
# Sbjct: 121 ALLGSHSVLYVAILRMWSMQLFIHVLSYKHVLMAAFVYCIHFCISFAHIQSLITCNSAQW 180
# Query: 192 QANDMEQKIPEGSSLEKLVLFYRPILANIQMSLLALEMLVFSLSVMMAVCNSFYILVSDA 251
+EQ +P+ + +E L+
ALEML+FSLS MMAV NSFY+LVSDA
# Sbjct: 181 EIPLLEQHVPDNTMMESLLTRWKPVCVNLYLSTTALEMLLFSLSTMMAVGNSFYVLVSDA 240
# Query: 252 VFGAVNLFLIISLVWHIGAEVFLAKYLRHHVGFYIGLFVAYVIMLLPVIRYDAIFVTSRL 311
+FGAVN+FL +++VW+I
VGFY+G+ V Y+I+LLPVIRY+
# Sbjct: 241 IFGAVNMFLALTVVWYINTEFFLVKFMRRQVGFYVGVLVGYLILLLPVIRYENAFVQANL 300
# Query: 312 HKPITINMTIIPIICLIIIVVRIIRLRSQTST-KVTYKKLGISG-AMEAQPFQSIPQPP- 368
+ IN++ IPI+C++ IV+R+IR
# Sbjct: 301 HYIVAINISCIPILCILAIVIRVIRSDWGLCTPSAAYMPLATSAPTVDRTPTVHQKPPPL 360
# Query: 369 ------RAKYTDLET 377
# Sbjct: 361 PAKTRARAKVKDIST 375
# >gi|9625995|ref|NP_| (NC_001350) integral membrane protein [Saimiriine herpesvirus 2]
Length = 366
366 bits (939), Expect = e-102
Identities = 164/329 (49%), Positives = 240/329 (72%)
# Query: 12
LEPSRSDSFLLKSWTNLLALLTLLFVTSSTVPILASFRGVGFPCYFVNLVDYSTLNLTVR 71
++ SRSD+F+L++W
++F+ S+ +PI AS
G+GFPCYF NLVDYS LNLT+R
# Sbjct: 2
MKASRSDTFMLRTWIQLLVLFVIMFIMSAILPIAASVEGLGFPCYFPNLVDYSLLNLTLR 61
# Query: 72
NSAKHLTPTLFLEGPEMFVYIVWSFLTEAINIIYFIFGAVTVYRLKKIFMPSLNAIQVWL 131
N+AKHLTPTLFLE PE+FVYI WS L +
+ IY++ GA+ + + +K
# Sbjct: 62
NAAKHLTPTLFLEAPELFVYITWSVLVDLASAIYYVVGALAILQARKTHLTSMITLQTWI 121
# Query: 132 TLIGGHSTLYLSIARLWTLQLFVHVLSFKQIFLAAFVYLFHFMLSYVHVHVFISRYVPQW 191
L+G H+ L++ IAR+WTLQLF+HVLS+K + LAAF+Y
# Sbjct: 122 NLVGSHTMLFIGIARMWTLQLFIHVLSYKHVMLAAFIYFLHFCLSYMHTLSLVSRNSPKW 181
# Query: 192 QANDMEQKIPEGSSLEKLVLFYRPILANIQMSLLALEMLVFSLSVMMAVCNSFYILVSDA 251
MEQ IP+ S L
N+ +SLLALEMLVFSL
MMA+ NSFYILVSD
# Sbjct: 182 SVLLMEQHIPKQSLLSTILDYGKPLCVNMYLSLLALEMLVFSLGFMMAIGNSFYILVSDT 241
# Query: 252 VFGAVNLFLIISLVWHIGAEVFLAKYLRHHVGFYIGLFVAYVIMLLPVIRYDAIFVTSRL 311
+I+LLPV+RY+A+FV++ L
# Sbjct: 242 VLASINLYFVLTTFWYMMTEMFLQDYLKLQFGFYLGVFSGSLILLLPVLRYEAVFVSANL 301
# Query: 312 HKPITINMTIIPIICLIIIVVRIIRLRSQ 340
HK + +N+ +IP +C+I ++ R+ R
# Sbjct: 302 HKTVAVNIAMIPAMCVIAMMFRLFRYSQQ 330
# >gi|9631231|ref|NP_| (NC_001987) orf 39 [Ateline herpesvirus 3]
Length = 365
357 bits (916), Expect = 2e-99
Identities = 160/341 (46%), Positives = 244/341 (70%), Gaps = 5/341 (1%)
# Query: 15
SRSDSFLLKSWTNLLALLTLLFVTSSTVPILASFRGVGFPCYFVNLVDYSTLNLTVRNSA 74
SRSD+F+L+SW
++FV S+ +P+ AS
G+GFPCYF NLV+YS LNLT+RN+A
# Sbjct: 4
SRSDTFMLRSWIQLLVLFLMMFVMSAILPMAASVEGLGFPCYFPNLVNYSLLNLTLRNAA 63
# Query: 75
KHLTPTLFLEGPEMFVYIVWSFLTEAINIIYFIFGAVTVYRLKKIFMPSLNAIQVWLTLI 134
KHLTPTLFLE PE+FVYI WS L +
+ IY++ GAV +++ +K
# Sbjct: 64
KHLTPTLFLEAPELFVYITWSVLVDLASAIYYVIGAVAIFKARKTHVTTMRTLQTWIHLV 123
# Query: 135 GGHSTLYLSIARLWTLQLFVHVLSFKQIFLAAFVYLFHFMLSYVHVHVFISRYVPQWQAN 194
G H+ L++ + R+WTLQLF+HVLS+K + LAAF+Y
# Sbjct: 124 GSHTMLFIGLTRMWTLQLFIHVLSYKHVMLAAFIYCIHFCLSYTHSLSIVSRNSPKWSVV 183
# Query: 195 DMEQKIPEGSSLEKLVLFYRPILANIQMSLLALEMLVFSLSVMMAVCNSFYILVSDAVFG 254
MEQ IP+ S L
N+ +SLLA+EMLVF+L VMMA+ NSFYILVSD V
# Sbjct: 184 LMEQHIPKQSLLSTILRYGKPVCVNMYLSLLAVEMLVFALGVMMAIGNSFYILVSDTVLA 243
# Query: 255 AVNLFLIISLVWHIGAEVFLAKYLRHHVGFYIGLFVAYVIMLLPVIRYDAIFVTSRLHKP 314
+I+LLP++RY+ +FV++ LH+
# Sbjct: 244 SINLYFVLTTFWYMMTEIFLHEYIKLQLGFYLGVYSGSLILLLPLLRYEHVFVSANLHRT 303
# Query: 315 ITINMTIIPIICLIIIVVRIIRL-----RSQTSTKVTYKKL 350
C+I ++ RI R
# Sbjct: 304 VAVNIAMVPATCVIAMMFRIFRYSYQYRKSRNDYKPVPKKL 344
# >gi||ref|NP_| (NC_002665) glycoprotein M [Bovine herpesvirus 4]
Length = 369
349 bits (896), Expect = 4e-97
Identities = 166/337 (49%), Positives = 232/337 (68%), Gaps = 1/337 (0%)
# Query: 12
LEPSRSDSFLLKSWTNLLALLTLLFVTSSTVPILASFRGVGFPCYFVNLVDYSTLNLTVR 71
++ S+SD+ L
LV+YS LNLT+R
# Sbjct: 1
MKASKSDTILFGMWFKLLILYWIILIFTVVVPITATIEHMGFPCDFTALVNYSALNLTIR 60
# Query: 72
-NSAKHLTPTLFLEGPEMFVYIVWSFLTEAINIIYFIFGAVTVYRLKKIFMPSLNAIQVW 130
++ KHLTPTLFLE PEM+VYIVW F
IY+I G + +YR +K
# Sbjct: 61
RDNNKHLTPTLFLEKPEMYVYIVWFFTVDFFGSIYYIIGCIAMYRARKKHVSTMTTIQTW 120
# Query: 131 LTLIGGHSTLYLSIARLWTLQLFVHVLSFKQIFLAAFVYLFHFMLSYVHVHVFISRYVPQ 190
++L+G H+ L+LSI RLWT+QLF+ VLS+K
LA+FVY FHF
# Sbjct: 121 ISLMGSHTLLFLSILRLWTMQLFIQVLSYKLTLLASFVYCFHFCFSFAHVQNSISKNSST 180
# Query: 191 WQANDMEQKIPEGSSLEKLVLFYRPILANIQMSLLALEMLVFSLSVMMAVCNSFYILVSD 250
N+ MS+LALEMLVFSL+ MMAV NSFYILVSD
# Sbjct: 181 WAVMIAEQQIPSNTMLEKIIFTYKPIFNNLYMSVLALEMLVFSLTFMMAVGNSFYILVSD 240
# Query: 251 AVFGAVNLFLIISLVWHIGAEVFLAKYLRHHVGFYIGLFVAYVIMLLPVIRYDAIFVTSR 310
FGA+N++L ++++W+I
E FL +Y+R H GFY G+FV Y+I++LP+IRY+
# Sbjct: 241 TAFGAINIYLFLTIIWYINTETFLVRYMRKHFGFYFGVFVGYIILILPLIRYEHAFVQAN 300
# Query: 311 LHKPITINMTIIPIICLIIIVVRIIRLRSQTSTKVTY 347
I+IN++ IP IC+
# Sbjct: 301 LESVISINISTIPFICICAIIVRWVRYRYALRSKSAY 337
# >gi|9628042|ref|NP_| (NC_001650) glycoprotein M [Equine herpesvirus 2]
Length = 378
330 bits (846), Expect = 2e-91
Identities = 161/371 (43%), Positives = 242/371 (64%), Gaps = 4/371 (1%)
# Query: 12
LEPSRSDSFLLKSWTNLLALLTLLFVTSSTVPILASFRGVGFPCYFVNLVDYSTLNLTVR 71
++ S+SD F+ K+W
++FV S+TVPI ASF G+GFPCY+
LV+YS +NLT R
# Sbjct: 1
MKSSKSDLFIYKTWFKLLVLYFVMFVLSATVPIAASFPGLGFPCYYNALVNYSAINLTER 60
# Query: 72
NSAKHLTPTLFLEGPEMFVYIVWSFLTEAINIIYFIFGAVTVYRLKKIFMPSLNAIQVWL 131
N AKHLTPTL+LE PEMF Y+ ++FL +
# Sbjct: 61
NVAKHLTPTLYLEEPEMFAYMTFTFLVDCFAAVYYFLGALAIMLAKRHFVVSLTTLSQWI 120
# Query: 132 TLIGGHSTLYLSIARLWTLQLFVHVLSFKQIFLAAFVYLFHFMLSYVHVHVFISRYVPQW 191
+ + + + R+WT+QLF+
LS+K I+L+AFVYL HF+LS++H
# Sbjct: 121 AMVGTPTLILIGMWRMWTIQLFIQTLSYKHIYLSAFVYLIHFLLSFLHTQCYISRNSQLW 180
# Query: 192 QANDMEQKIPEGSSLEKLVLFYRPILANIQMSLLALEMLVFSLSVMMAVCNSFYILVSDA 251
L LEMLVFSLS MMA+ NSFY+LVSD
# Sbjct: 181 SLKVLEQGIPPNTLLDTVVFTIKPLLANCQLFCLGLEMLVFSLSFMMAIGNSFYVLVSDI 240
# Query: 252 VFGAVNLFLIISLVWHIGAEVFLAKYLRHHVGFYIGLFVAYVIMLLPVIRYDAIFVTSRL 311
VFGA+NL+L + L W +
+ +L+P+ RY+ IFV + L
# Sbjct: 241 VFGAINLYLALVLFWVLLTELYLVKYMTFVMGFYLGGLIGCIFLLVPLWRYEQIFVAANL 300
# Query: 312 HKPITINMTIIPIICLIIIVVRIIRLRSQTSTKVTYKKLGISGAMEAQPFQSIPQPPRAK 371
+ TK +Y+ + +
# Sbjct: 301 RSPILINILVIFFLCTLSALVRLLRMTWFSPTKPSYEPIQLKNIKHRRVKLQSPSGP--- 357
# Query: 372 YTDLETESEDE 382
# Sbjct: 358 -SILEEGSSDE 367
# >gi||ref|NP_| (NC_002531) integral membrane protein [Alcelaphine herpesvirus 1]
Length = 374
328 bits (841), Expect = 9e-91
Identities = 148/339 (43%), Positives = 233/339 (68%), Gaps = 2/339 (0%)
# Query: 12
LEPSRSDSFLLKSWTNLLALLTLLFVTSSTVPILASFRGVGFPCYFVNLVDYSTLNLTVR 71
++ S+ D F+L
# Sbjct: 1
MKSSKKDIFILHIWLKLMGCYVFMFITSVVLPIAAMFPNLGFPCYYNTLVDYSKLNLREK 60
# Query: 72
NSAKHLTPTLFLEGPEMFVYIVWSFLTEAINIIYFIFGAVTVYRLKKIFMPSLNAIQVWL 131
N A+HLTPTLFLE PEMF Y+ +SF+ +
# Sbjct: 61
NQAQHLTPTLFLEAPEMFFYVTYSFIVDCCSLVYYALAAVAVVKAKK-HAPGLMALSQWI 119
# Query: 132 TLIGGHSTLYLSIARLWTLQLFVHVLSFKQIFLAAFVYLFHFMLSYVHVHVFISRYVPQW 191
+ LY+++ +LWT+QL++H LS+K I+LAAFVY
# Sbjct: 120 MAVGSPTLLYMAVLKLWTIQLYIHTLSYKHIYLAAFVYCLHWLLSMVYTECYITNVSSQW 179
# Query: 192 QANDMEQKIPEGSSLEKLVLFYRPILANIQMSLLALEMLVFSLSVMMAVCNSFYILVSDA 251
++++++ IPE
+PI+ N+ +S++ALE L+F LS MMA+ NSFY++VSD
# Sbjct: 180 TSSELKKTIPENILLYRVVHVLKPIMMNVHLSVVALETLIFCLSFMMAIGNSFYVMVSDI 239
# Query: 252 VFGAVNLFLIISLVWHIGAEVFLAKYLRHHVGFYIGLFVAYVIMLLPVIRYDAIFVTSRL 311
VFGA+NL+LI+ ++W+
GFY G+ VA +I++LPV+RYD IFV +++
# Sbjct: 240 VFGAINLYLILPIIWYFVTEFWLSKYLPRQFGFYFGVLVASIILILPVVRYDKIFVAAQI 299
# Query: 312 HKPITINMTIIPIICLIIIVVRIIRLRSQTSTKVTYKKL 350
H+ ++IN+ +IP+
# Sbjct: 300 HRAVSINIAMIPLCALVALLVRACRVYTDRK-KIAYTAL 337
# >gi|9625633|ref|NP_| (NC_001345) integral membrane protein [Human herpesvirus 4]
Length = 405
319 bits (817), Expect = 6e-88
Identities = 150/356 (42%), Positives = 238/356 (66%), Gaps = 4/356 (1%)
# Query: 12
LEPSRSDSFLLKSWTNLLALLTLLFVTSSTVPILASFRGVGFPCYFVNLVDYSTLNLTVR 71
++ S++D+F+ ++W
++FV S+ VPI A F
# Sbjct: 1
MKSSKNDTFVYRTWVKTLVVYFVMFVMSAVVPITAMFPNLGYPCYFNALVDYGALNLTNY 60
# Query: 72
NSAKHLTPTLFLEGPEMFVYIVWSFLTEAINIIYFIFGAVTVYRLKKIFMPSLNAIQVWL 131
N A HLTPTL+LE PEMFVYI
G V + + +K
# Sbjct: 61
NLAHHLTPTLYLEPPEMFVYITLVFIADCVAFIYYACGEVALIKARKK-VSGLTDLSAWV 119
# Query: 132 TLIGGHSTLYLSIARLWTLQLFVHVLSFKQIFLAAFVYLFHFMLSYVHVHVFISRYVPQW 191
+ L+L+I +LW++Q+F+ VLS+K +FL+AFVY
# Sbjct: 120 SAVGSPTVLFLAILKLWSIQVFIQVLSYKHVFLSAFVYFLHFLASVLHACACVTRFSPVW 179
# Query: 192 QANDMEQKIPEGSSLEKLVLFYRPILANIQMSLLALEMLVFSLSVMMAVCNSFYILVSDA 251
+V + +P++ N+ +
LALE LVFSLSV +A+ NSFY +V D
# Sbjct: 180 VVKAQDNSIPQDTFLWWVVFYLKPVVTNLYLGCLALETLVFSLSVFLALGNSFYFMVGDM 239
# Query: 252 VFGAVNLFLIISLVWHIGAEVFLAKYLRHHVGFYIGLFVAYVIMLLPVIRYDAIFVTSRL 311
V GAVNLFLI+ + W+I
EV+LA +LRH+ GFY G+F+A +I++LP++RY+A+FV+++L
# Sbjct: 240 VLGAVNLFLILPIFWYILTEVWLASFLRHNFGFYCGMFIASIILILPLVRYEAVFVSAKL 299
# Query: 312 HKPITINMTIIPIICLIIIVVRIIRLRSQTSTKVTYKKLGISGAMEAQPFQSIPQP 367
+ IN+ IIPI+C + +++RI R+
# Sbjct: 300 HTTVAINVAIIPILCSVAMLIRICRIFKSMRQGTDY--VPVSETVELE-LESEPRP 352
# >gi|9628794|ref|NP_| (NC_001716) glycoprotein M [Human herpesvirus 7]
Length = 346
148 bits (374), Expect = 1e-36
Identities = 90/336 (26%), Positives = 171/336 (50%), Gaps = 8/336 (2%)
# Query: 15
SRSDSFLLKSWTNLLALLTLLFVTSSTVPILASFRGVGFPCYFVNLVDYSTLNLTVRNSA 74
# Sbjct: 4
SRVDVINMRIWVLSIICACLTYVNVTVHLVAVHFPNLGFPCAYYEINDMKAINLSIRNDI 63
# Query: 75
KHLTPTLFLEGPEMFVYIVWSFLTEAINIIYFIFGAVTVYRLKKIFMPSLNAIQVWLTLI 134
# Sbjct: 64
RSLTPQLYLNPIQLICYVVFMDICFFFILVYYIVCCVKVFSSEKT--PNINQSTRDITWM 121
# Query: 135 GGHSTLYLSIARLWTLQLFVHVLSFKQIFLAAFVYLFHFMLSYVHVHVFISRYVPQWQAN 194
LSF+ + LAAF Y
# Sbjct: 122 GDSLSCFQFVLTMDTYQFFVTCLSFRLVTLAAFTYCLFFICFTAFTLTMITQYQSSERSF 181
# Query: 195 DMEQKIPEGSSLEKLVLFYRPILANIQMSLLALEMLVFSLSVMMAVCNSFYILVSDAVFG 254
+ Y+ I+ N+
+VF++++ + + N+FYI
# Sbjct: 182 FVLKRIHPKL---KGTIKYKTIIINMIELMLGFSSMVFAITICLGLGNNFYIKSSTVAFA 238
# Query: 255 AVNLFLIISLVWHIGAEVFLAKYLRHHVGFYIGLFVAYVIMLLPVIRYDAIFVTSRLHKP 314
++N F ++S V+ +
P+++YD++F T
# Sbjct: 239 SINTFFVMSFVYSLVIELILHQYVKVQFGLHFGILFGILGLTYPILKYDSLFKTEWTVKF 298
# Query: 315 ITINMTIIPIICLIIIVVRIIRLRSQTSTKVTYKKL 350
I +N+ +I I+CL
# Sbjct: 299 I-VNLAVITIVCLSFIICRLIRFFMRKHH--NYKKL 331
# >gi|9633141|ref|NP_| (NC_000898) glycoprotein M [Human herpesvirus 6B]
Length = 344
127 bits (319), Expect = 3e-30
Identities = 88/340 (25%), Positives = 161/340 (46%), Gaps = 16/340 (4%)
# Query: 15
SRSDSFLLKSWTNLLALLTLLFVTSSTVPILASFRGVGFPCYFVNLVDYSTLNLTVRNSA 74
# Sbjct: 4
SRVDTINLRIWLVSIICAALSFINVTVHLIAINFPNLGFPCAYFEINDLKAVNLSANNEI 63
# Query: 75
KHLTPTLFLEGPEMFVYIVWSFLTEAINIIYFIFGAVTVYRLKKIFMPSLNAIQVWLTLI 134
# Sbjct: 64
YQMTHQLYINPVQIICYVLIMAILFLLIIIYYIVCCAKVFSSNKT--SNVNQTTRDITWM 121
# Query: 135 GGHSTLYLSIARLWTLQLFVHVLSFKQIFLAAFVYLFHFMLSYVHVHVFISRYVPQWQAN 194
LSF+ + L AF Y
# Sbjct: 122 GDTSSCFQFILIMDTFQLFVTALSFRLVALGAFAYSIFF----VCFTTFNVTLITQFQSA 177
# Query: 195 DME----QKIPEGSSLEKLVLFYRPILANIQMSLLALEMLVFSLSVMMAVCNSFYILVSD 250
+ ++ ++ N+
# Sbjct: 178 DKSFFAFQKIHPNL---KGTVQFKTVVINLSELMLGYSTMFLGITTCLGVGNSIYIRSIT 234
# Query: 251 AVFGAVNLFLIISLVWHIGAEVFLAKYLRHHVGFYIGLFVAYVIMLLPVIRYDAIFVTSR 310
F ++N FL+++ ++ I
# Sbjct: 235 VAFSSINTFLVMACIYSIVIEAVLVRYVKPLFGYYVGMFCGAVGLSFPILQYETFF-ESE 293
# Query: 311 LHKPITINMTIIPIICLIIIVVRIIRLRSQTSTKVTYKKL 350
+ IN++++ II +
# Sbjct: 294 WSTGLIINLSVVAIISIGFIICRLVRY--LVKKKRRYKQL 331
# >gi|9628374|ref|NP_| (NC_001664) integral membrane protein, glycoprotein M, gM [Human
herpesvirus 6]
Length = 344
127 bits (318), Expect = 4e-30
Identities = 88/340 (25%), Positives = 160/340 (46%), Gaps = 16/340 (4%)
# Query: 15
SRSDSFLLKSWTNLLALLTLLFVTSSTVPILASFRGVGFPCYFVNLVDYSTLNLTVRNSA 74
# Sbjct: 4
SRVDTINLRIWLVSIICAALSFINVTVYLIAINFPNLGFPCAYFEINDLKAVNLSANNQI 63
# Query: 75
KHLTPTLFLEGPEMFVYIVWSFLTEAINIIYFIFGAVTVYRLKKIFMPSLNAIQVWLTLI 134
# Sbjct: 64
YQMTHQLYINPVQIICYVLIMAMLFLLIIIYYIVCCAKVFSSNKT--SNVNQTTRDITWM 121
# Query: 135 GGHSTLYLSIARLWTLQLFVHVLSFKQIFLAAFVYLFHFMLSYVHVHVFISRYVPQWQAN 194
LSF+ + L AF Y
# Sbjct: 122 GDTSSCFQFILIMDTFQLFVTALSFRLVALGAFAYCIFF----VCFTTFNVTLITQFQSA 177
# Query: 195 DME----QKIPEGSSLEKLVLFYRPILANIQMSLLALEMLVFSLSVMMAVCNSFYILVSD 250
+ ++ ++ N+
# Sbjct: 178 DKSFFAFQKIHPNL---KGTVQFKTVVINLTELMLGYSTMFLGITTCLGVGNSIYIRSIT 234
# Query: 251 AVFGAVNLFLIISLVWHIGAEVFLAKYLRHHVGFYIGLFVAYVIMLLPVIRYDAIFVTSR 310
+ ++N FL+++ ++ I
# Sbjct: 235 VAYSSINTFLVMACIYSIVIEAVLVRYVKPLFGYYVGMFCGAVGLSFPILQYETFF-ESE 293
# Query: 311 LHKPITINMTIIPIICLIIIVVRIIRLRSQTSTKVTYKKL 350
+ IN+ +I II +
# Sbjct: 294 WSTGLIINLAVIAIISIGFIICRLVRY--LVKKKRRYKQL 331
# >gi|9845387|ref|NP_| (NC_002512) pR100 [Rat cytomegalovirus]
Length = 351
126 bits (316), Expect = 7e-30
Identities = 86/336 (25%), Positives = 162/336 (47%), Gaps = 24/336 (7%)
# Query: 12
LEPSRSDSFLLKSWTNLLALLTLLFVTSSTVPILASFRGVGFPCYFVNLVDYSTLNLTVR 71
I A F G GFPCY+
# Sbjct: 1
MQISHVDRVNLKTWTLSILCCAASFVNVVVFSIAAHFPGAGFPCYYPRMIDFDNLNLSNY 60
# Query: 72
NSAKHLTPTLFLEGPEMFVYIVWSFLTEAI---NIIYFIFGAVTVYRLKKIFMPS--LNA 126
# Sbjct: 61
NAIHHLTPHLYLDATQLVMYVI---LTESVFFCIVVYYLVCWVRIFFRKDGGGDGKRVNQ 117
# Query: 127 IQVWLTLIGGHSTLYLSIARLWTLQLFVHVLSFKQIFLAAFVYLFHFMLSYVHVHVFISR 186
# Sbjct: 118 STQDISCLGDTASCFAFVLTVDTFQVFVLSLAFRLPSMVAFAKCLYFISLTGFTVTCVTN 177
# Query: 187 YVPQWQANDMEQKIPEGSSLEKL------VLFYRPILANIQMSLLALEMLVFSLSVMMAV 240
# Sbjct: 178 Y---------ESRERNAFALSKLHPKLQGTVQYRTAVINMTQFLLGLATMVLALSLALGF 228
# Query: 241 CNSFYILVSDAVFGAVNLFLIISLVWHIGAEVFLAKYLRHHVGFYIGLFVAYVIMLLPVI 300
VF A+ +F I++ V+
# Sbjct: 229 GNSFFVKTGHMVFAAMAVFGIVACVYFSIIEAVLVHYVKVQFGFHAGSVFSVCAAMYPII 288
# Query: 301 RYDAIFVTSRLHKPITINMTIIPIICLIIIVVRIIR 336
+ I I +T++ ++C+
# Sbjct: 289 TYERL-NASEFARDINIGLTVLLLLCIGFTIIRIVR 323
# >gi||ref|NP_| (NC_002794) T100 [Tupaia herpesvirus]
Length = 351
117 bits (292), Expect = 4e-27
Identities = 77/323 (23%), Positives = 157/323 (47%), Gaps = 7/323 (2%)
# Query: 15
SRSDSFLLKSWTNLLALLTLLFVTSSTVPILASFRGVGFPCYFVNLVDYSTLNLTVRNSA 74
# Sbjct: 4
SHVDGINLKTWTFSIMCALLTFVNVSVHLIASNYPHLGYPCIYYRIIDFDQLNMSTFNVF 63
# Query: 75
KHLTPTLFLEGPEMFVYIVWSFLTEAINIIYFIFGAVTVYRLKKIFMPSLNAIQVWLTLI 134
# Sbjct: 64
HQLTPQLYLDAGQIVAYVTFMQFVFLLILIYYLVCWGKIY-FRRDGGHHVNQSSRDIAYM 122
# Query: 135 GGHSTLYLSIARLWTLQLFVHVLSFKQIFLAAFVYLFHFMLSYVHVHVFISRYVPQWQAN 194
# Sbjct: 123 GDSLSCFLYILCMDTFQLFTLTLSFRLPSLVAFTHCLHFISLTVYVVTMLTQYQSYERSS 182
# Query: 195 DMEQKI-PEGSSLEKLVLFYRPILANIQMSLLALEMLVFSLSVMMAVCNSFYILVSDAVF 253
# Sbjct: 183 FALTKIHPRLTGTVK----FKTAILNMTECALGFATMVFAMSLALGFGNSFFVRTGPVVF 238
# Query: 254 GAVNLFLIISLVWHIGAEVFLAKYLRHHVGFYIGLFVAYVIMLLPVIRYDAIFVTSRLHK 313
G ++ F +++ ++ I
L PV++Y+ +
# Sbjct: 239 GMLSTFTVVAGLYLIVLETVLHRYMKVQFGYHLGLLCGLCGALYPVLKYERV-AASTYAR 297
# Query: 314 PITINMTIIPIICLIIIVVRIIR 336
# Sbjct: 298 SINLFIGLLFAAWVVFALCRAVR 320
# >gi|9625786|ref|NP_| (NC_001347) glycoprotein M [human herpesvirus 5]
Length = 372
112 bits (280), Expect = 1e-25
Identities = 83/375 (22%), Positives = 169/375 (44%), Gaps = 12/375 (3%)
# Query: 12
LEPSRSDSFLLKSWTNLLALLTLLFVTSSTVPILASFRGVGFPCYFVNLVDYSTLNLTVR 71
+G+PC + ++VD+
# Sbjct: 1
MAPSHVDKVNTRTWSASIVFMVLTFVNVSVHLVLSNFPHLGYPCVYYHVVDFERLNMSAY 60
# Query: 72
NSAKHLTPTLFLEGPEMFVYIVWSFLTEAINIIYFIFGAVTVYRLKKIFMPSLNAIQVWL 131
# Sbjct: 61
NVMHLHTPMLFLDSVQLVCYAVFMQLVFLAVTIYYLVCWIKISMRKDKGM-SLNQSTRDI 119
# Query: 132 TLIGGHSTLYLSIARLWTLQLFVHVLSFKQIFLAAFVYLFHFMLSYVHVHVFISRYVPQW 191
# Sbjct: 120 SYMGDSLTAFLFILSMDTFQLFTLTMSFRLPSMIAFMAAVHFFCLTIFNVSMVTQY---- 175
# Query: 192 QANDMEQKIPEGSSLE---KLVLFYRPILANIQMSLLALEMLVFSLSVMMAVCNSFYILV 248
+ +R ++ N+
# Sbjct: 176 --RSYKRSLFFFSRLHPKLKGTVQFRTLIVNLVEVALGFNTTVVAMALCYGFGNNFFVRT 233
# Query: 249 SDAVFGAVNLFLIISLVWHIGAEVFLAKYLRHHVGFYIGLFVAYVIMLLPVIRYDAIFVT 308
++ IIS+++ +
# Sbjct: 234 GHMVLAVFVVYAIISIIYFLLIEAVFFQYVKVQFGYHLGAFFGLCGLIYPIVQYDT-FLS 292
# Query: 309 SRLHKPITINMTIIPIICLIIIVVRIIR-LRSQTSTKVTYKKLGISGAMEAQPFQSIPQP 367
# Sbjct: 293 NEYRTGISWSFGMLFFIWAMFTTCRAVRYFRGRGSGSVKYQALATASGEEVAVLSHHDSL 352
# Query: 368 PRAKYTDLETESEDE 382
# Sbjct: 353 ESRRLREEEDDDDDE 367
# >gi|9626789|ref|NP_| (NC_001491) membrane protein [Equine herpesvirus 1]
Length = 450
107 bits (268), Expect = 3e-24
Identities = 89/320 (27%), Positives = 153/320 (47%), Gaps = 22/320 (6%)
# Query: 33
TLLFVTSSTVPILASFRGVGFPCYFVNLVDYSTLNLTV------RNSAKHLTPTLFLEGP 86
G+PC++ +LVDY+
# Sbjct: 45
SVLFITLVT----ASLPQTGYPCFYGSLVDYTQKNHSVVDGVWMRQIAGGVAPTLFLETT 100
# Query: 87
EMFVYIVWSFLTEAINIIYFIFGAVTV--YRLKKIFMPSLNAIQVWLTLIGGHSTLYLSI 144
# Sbjct: 101 SLVAFLYYTTLVLVAISFYLIISAVLVRRYARGKECTAVAGCTRPTTTLIASHVTLVLGT 160
# Query: 145 ARLWTLQLFVHVLSFKQIFLAAFVYLFHFMLSYVHVHVF--ISRYVPQWQAN--DMEQKI 200
W LQ+ + +LS KQ
L A VY+ HF+
# Sbjct: 161 LATWLLQVVILLLSHKQAVLGAAVYVVHFVSLVFFCMSFSGLGTASAQYSSNLRILKTNL 220
# Query: 201 PEGSSLEKLVLFYRPILANIQMSLLALEMLVFSLSVMMAVCNSFYILVSDAVFGAVNLFL 260
R ++ N+ M +L + + + SL + + + NSF+I +
# Sbjct: 221 P---ALHKMAGPGRAVMTNLGMGMLGISLPILSLMLGIILANSFHITLWQTVTVAVGVFV 277
# Query: 261 IISLVWHIGAEVFLAKYLRHHVGFYIGLFVAYVIMLLPVIRYDAIF---VTSRLHKPITI 317
# Sbjct: 278 ALGLMFLIIVELIVSHYVHVLVGPALAVLVASSTLAVATHSYFVHFHAMVSVQAPNLATA 337
# Query: 318 NMTIIPIICLIIIVVRIIRL 337
I+ I+ +I I++ ++RL
# Sbjct: 338 SKAIVGIMAVISIIMLVVRL 357
# >gi|9629780|ref|NP_| (NC_ [Equine herpesvirus 4]
Length = 450
105 bits (262), Expect = 1e-23
Identities = 86/333 (25%), Positives = 156/333 (46%), Gaps = 28/333 (8%)
# Query: 33
TLLFVTSSTVPILASFRGVGFPCYFVNLVDYSTLNLTVRNSA------KHLTPTLFLEGP 86
G+PC++ +LVDY+
# Sbjct: 45
SVLFITLVT----ASLQKTGYPCFYGSLVDYTQENHSVVNGVWMQKIVGGVAPTLFLETT 100
# Query: 87
EMFVYIVWSFLTEAINIIYFIFGAVTVYRLK--KIFMPSLNAIQVWLTLIGGHSTLYLSI 144
# Sbjct: 101 SLVAFLYYSTIVLMAISLYLIISAVLLRKFARGKECTAVAGCSRPTTTLIASHVTLVLGT 160
# Query: 145 ARLWTLQLFVHVLSFKQIFLAAFVYLFHFMLSYVHVHVF--ISRYVPQWQAN--DMEQKI 200
W LQ+ + +LS KQ+ LAA
# Sbjct: 161 LTTWLLQVVILLLSHKQVVLAAAAYIVHFVALVFFCLSFSGLGTSSDQYSSNLRILKTNM 220
# Query: 201 PEGSSLEKLVLFYRPILANIQMSLLALEMLVFSLSVMMAVCNSFYILVSDAVFGAVNLFL 260
R ++ N+ + +L + + + SL + + + NSF+I +
# Sbjct: 221 P---VLHRMAGHGRAVMTNLSLGMLGISLPILSLMLGVILANSFHITLWQTVTVAVGVFV 277
# Query: 261 IISLVWHIGAEVFLAKYLRHHVGFYIGLFVAYVIMLLPVIRYDAIFVT---------SRL 311
# Sbjct: 278 ALGLLFLIIVELVVSHYVHVLIGPALAVLVASSTLAVATHSYFVHFHTMVSVQAPNLATA 337
# Query: 312 HKPITINMTIIPIICLIIIVVRIIRLRSQTSTK 344
M +I II L++ +VR I
# Sbjct: 338 SKAVVGIMAVISIIMLVVRLVRAIMFHKKRNTE 370
# >gi|9625925|ref|NP_| (NC_001348) virion membrane glycoprotein M [Human herpesvirus 3]
Length = 435
102 bits (255), Expect = 8e-23
Identities = 86/340 (25%), Positives = 154/340 (45%), Gaps = 11/340 (3%)
# Query: 7
PQLKKLEPSRSDSFLLKSWTNLLALLTLLFVTSSTVPILASFRGVGFPCYFVNLVDYSTL 66
# Sbjct: 21
PEVEALD-HQMDTLNWRIWIIQVMMFTLGAVMLLATLIAASSEYTGIPCFYAAVVDYELF 79
# Query: 67
NLTVR------NSAKHLTPTLFLEGPEMFVYIVWSFLTEAINIIYFIFGAVTVYRLKKIF 120
# Sbjct: 80
NATLDGGVWSGNRGGYSAPVLFLEPHSVVAFTYYTALTAMAMAVYTLITAAIIHRETKNQ 139
# Query: 121 MPSLNAIQVWLTLIGGHSTLYLSIARLWTLQLFVHVLSFKQIFLAAFVYLFHFMLSYVHV 180
V +L++KQI +AA +YL HF
# Sbjct: 140 RVRQSSGVAWLVV--DPTTLFWGLLSLWLLNAVVLLLAYKQIGVAATLYLGHFATSVIFT 197
# Query: 181 HVFISR-YVPQWQANDMEQKIPEGSSLEKLVLFYRPILANIQMSLLALEMLVFSLSVMMA 239
# Sbjct: 198 TYFCGRGKLDETNIKAVANLRQQSVFLYRLAGPTRAVFVNLMAALMAICILFVSLMLELV 257
# Query: 240 VCNSFYILVSDAVFGAVNLFLIISLVWHIGAEVFLAKYLRHHVGFYIGLFVAYVIMLLPV 299
+S+V+ I +E+ LA Y+
# Sbjct: 258 VANHLHTGLWSSVSVAMSTFSTLSVVYLIVSELILAHYIHVLIGPSLGTLVACATLGTAA 317
# Query: 300 IRY-DAIFVTSRLHKPITINMTIIPIICLIIIVVRIIRLR 338
# Sbjct: 318 HSYMDRLYDPISVQSPRLIPTTRGTLACLAVFSVVMLLLR 357
# >gi||ref|NP_| (NC_002686) unknown [Cercopithecine herpesvirus 7]
Length = 439
Score = 99.4 bits (246), Expect = 9e-22
Identities = 79/332 (23%), Positives = 154/332 (45%), Gaps = 30/332 (9%)
# Query: 25
WTNLLALLTLLFVTSSTVPILASFRGVGFPCYFVNLVDYSTLNLTV-----RNSAKHLTP 79
# Sbjct: 45
WLTEALMFTLGAVMFLLAIIMASVEFTGLPCFYAAVVDYELFNATLDGGVWAGNKGYGAP 104
# Query: 80
TLFLEGPEMFVYIVWSFLTEAINIIYFIFGAVTVYRLKK---IFMPSLNAIQVWLTLIGG 136
# Sbjct: 105 VLFLEPRSILAFTYYKAVVMLAVAIYVIASAISIHRQGKNHYELRPCYNIAR----MIAT 160
# Query: 137 HSTLYLSIARLWTLQLFVHVLSFKQIFLAAFVYLFHFMLSYVHVHVFISRYVPQWQANDM 196
+ +L++KQ+ +A
# Sbjct: 161 PTTLFLGLFSLWLEHAVLILLAYKQVGIAGTVYVGQFITFVLFTGCFFGRGKIS-DVNDK 219
# Query: 197 EQKIPE-GSSLEKLVLFYRPILANIQMSLLALEMLVFSLSVMMAVCNSFYILVSDAVFGA 255
I E G+ L +LV
# Sbjct: 220 ELDIREYGNVLYRLVGPARAVFVNLVGALMSIDILITCLMLELVVANHSHLDLWSSVSTA 279
# Query: 256 VNLFLIISLVWHIGAEVFLAKYLRHHVGFYIGLFVAYVIMLLPVIRYDAIFVTSRLHKPI 315
+++F ++S+++ + AE+ +A Y+
# Sbjct: 280 LSMFTVMSIIYLVVAELTVAHYVHVLIGPSLGTLISCATLGTAAHAY-----MDRLYDPI 334
# Query: 316 TI-----------NMTIIPIICLIIIVVRIIR 336
+ ++ +++++VR+ R
# Sbjct: 335 TIQSPRLIQGTRGTLACLAVLSIVMLIVRVTR 366
# >gi||ref|NP_| (NC_003521) envelope glycoprotein UL100 [chimpanzee
cytomegalovirus]
Length = 363
Score = 98.6 bits (244), Expect = 2e-21
Identities = 69/305 (22%), Positives = 140/305 (45%), Gaps = 26/305 (8%)
# Query: 12
LEPSRSDSFLLKSWTNLLALLTLLFVTSSTVPILASFRGVGFPCYFVNLVDYSTLNLTVR 71
+G+PC + ++VD+
# Sbjct: 1
MAPSHVDRVNTRTWGASIVFMVLTFVNVSVHLVLSNFPDLGYPCVYYHVVDFKKINMSAF 60
# Query: 72
NSAKHLTPTLFLEGPEMFVYIVWSFLTEAINIIYFIFGAVTVYRL--------KKIFMPS 123
+F AVTVY L
# Sbjct: 61
NVMHLHTPTLFLDSVQLVCYAVF---------MQLVFLAVTVYYLVCWVKIAWRRDQSTV 111
# Query: 124 LNAIQVWLTLIGGHSTLYLSIARLWTLQLFVHVLSFKQIFLAAFVYLFHFMLSYVHVHVF 183
+ AF+ + HF
# Sbjct: 112 LNQSTRDISYMGDSLTAFLFILCMDTFQLLTLTMSFRLPSMIAFMSVVHFFCLTVFNISM 171
# Query: 184 ISRYVPQWQANDMEQKIPEGSSLEKLV---LFYRPILANIQMSLLALEMLVFSLSVMMAV 240
+ +R ++ N+
# Sbjct: 172 VTHY------QSYKRTLFHFSRLHPRLHGTVQFRTMIVNLVQVALGFNTVVVAMGLCYGF 225
# Query: 241 CNSFYILVSDAVFGAVNLFLIISLVWHIGAEVFLAKYLRHHVGFYIGLFVAYVIMLLPVI 300
++ +IS+V+ +
# Sbjct: 226 GNNFFVRTGHMVLAVFVVYAVISIVYFLMIESVFFQYVKVQFGYHLGTFFGLCGLIYPII 285
# Query: 301 RYDAI 305
# Sbjct: 286 KYEQL 290
# >gi|9635045|ref|NP_| (NC_002229) UL10 [Gallid herpesvirus 2]
Length = 424
Score = 89.0 bits (219), Expect = 1e-18
Identities = 81/347 (23%), Positives = 150/347 (42%), Gaps = 22/347 (6%)
# Query: 52
GFPCYFVNLVDYSTLNLTVRNSAKH------LTPTLFLEGPEMFVYIVWSFLTEAINIIY 105
+VDY T+N T+ ++
# Sbjct: 53
GFPCFFAAVVDYRTVNTTLVHTGLTYPRLGGVVPVLFFQTKAVVFFFYATSIVFVFLVCY 112
# Query: 106 FIFGAVTVYRLKKIFMPSLNAIQVWLTLIGGHSTLYLSIARLWTLQLFVHVLSFKQIFLA 165
V VL+ K I LA
# Sbjct: 113 ITVGAI-ISSKKHVGAAYMGSGAFVFSLMASPLTILLGTVSIWLLQAVVIVLAHKLIVLA 171
# Query: 166 AFVYLFHFMLSYVHVHVFISRYV-PQWQANDMEQKIPEGSSLEKLVLFYRPILANIQMSL 224
# Sbjct: 172 AAVYLVHFSTITFFYGYFCGRGVDSKVYAEDISSAKDIDGSLHKLIGNVRAMMVNLLSIV 231
# Query: 225 LALEMLVFSLSVMMAVCNSFYILVSDAVFGAVNLFLIISLVWHIGAEVFLAKYLRHHVGF 284
# Sbjct: 232 YSIILIMSSLMFGMLLAIVLHLKFWHVIVTVLITTSVLTLIYLLVIEFLIARYVHIILGA 291
# Query: 285 YIGLFVAYVIMLLPVIRYDAIFV------TSRLHKPITINMTIIPIICLIIIVVRIIR-- 336
YIGL + Y ++
++ L+ +VVR+IR
# Sbjct: 292 YIGLLIGYGMLWTTTCDYVNRFYYAMGANASNLRIACHSVLAVFTVLILLAMVVRLIRAS 351
# Query: 337 -LRSQTSTKVTYKKLGISGAMEAQPFQSIPQPPRAKYTDLETESEDE 382
# Sbjct: 352 LYHRRRSTRAYAKAMKLQQNVKHRLRQL-----RRSYKQRGSQSEDE 393
# >gi||ref|NP_| (NC_002577) glycoprotein M [Gallid herpesvirus 3]
Length = 424
Score = 85.5 bits (210), Expect = 1e-17
Identities = 64/248 (25%), Positives = 116/248 (45%), Gaps = 8/248 (3%)
# Query: 52
GFPCYFVNLVDYSTLNLTVRNSAKH------LTPTLFLEGPEMFVYIVWSFLTEAINIIY 105
# Sbjct: 53
GFPCFFAAVVDYGMTNVTLVHTGMTNPRLGGVVPVLFFQ-TKAVAFLFYSASVVFVCITC 111
# Query: 106 FIFGAVTVYRLKKIFMPSLNAIQVWLTLIGGHSTLYLSIARLWTLQLFVHVLSFKQIFLA 165
V VL+ K I LA
# Sbjct: 112 YIAVGAIITSKKRVGAAYTGRGAFVLSLMASPSTILLGTVSIWLLQAVVIVLAHKLIVLA 171
# Query: 166 AFVYLFHFMLSYVHVHVFISRYVP-QWQANDMEQKIPEGSSLEKLVLFYRPILANIQMSL 224
# Sbjct: 172 AAVYLVHFSTITFFYGYFCGRGVDSKVYAEDIAAAKNVDAGLHRLIGNGRAVMINLVSIV 231
# Query: 225 LALEMLVFSLSVMMAVCNSFYILVSDAVFGAVNLFLIISLVWHIGAEVFLAKYLRHHVGF 284
++ +++ SL + M + NSF +
# Sbjct: 232 YSMLLIMASLMLGMLLANSFTLKFWHVIVTVLITSSVLTLMYLLVLEFLVARYVHMILGA 291
# Query: 285 YIGLFVAY 292
# Sbjct: 292 YIGLLIAY 299
# >gi||ref|NP_| (NC_002641) UL10 virion membrane glycoprotein M [Meleagrid
herpesvirus 1]
Length = 423
Score = 80.9 bits (198), Expect = 3e-16
Identities = 76/327 (23%), Positives = 140/327 (42%), Gaps = 14/327 (4%)
# Query: 23
KSWTNLLALLTLLFVTSSTVPILASFR-GVGFPCYFVNLVDYSTLNLTVRNSAKH----- 76
+VDY+ +N +
# Sbjct: 23
KIWAIQAACFTIAVLAFLGTLMSASIHLAEGFPCFFAAVVDYAIVNTSTIHTGLTNPRLG 82
# Query: 77
-LTPTLFLEGPEMFVYIVWSFLTEAINIIYFIFGAVTVYRLKKIFMPSLNAIQVWLTLIG 135
+ + Y I GAV
# Sbjct: 83
GVVPVLFFQTKSTVFFFYAISIVFMVLMFYIIVGAVIANK-SHVGVAYMERGMFAYSLII 141
# Query: 136 GHSTLYLSIARLWTLQLFVHVLSFKQIFLAAFVYLFHFMLSYVHVHVFISRYV-PQWQAN 194
V VL+ K I LAA +YL +F
# Sbjct: 142 SPTTLLLGTVSMWLLQAIVIVLAHKLIVLAAAIYLVYFSAITFFYGYFCGRGVDSKVYAE 201
# Query: 195 DMEQKIPEGSSLEKLVLFYRPILANIQMSLLALEMLVFSLSVMMAVCNSFYILVSDAVFG 254
# Sbjct: 202 DVATTKYIDRTLHRMVGSVRAVVINLLSIVYSLILIMAGLMFGMLLANSFTLKFFHVIVV 261
# Query: 255 AVNLFLIISLVWHIGAEVFLAKYLRHHVGFYIGLFVAYVIMLLPVIRYDAIFV-----TS 309
+G Y+GL + Y ++ +
# Sbjct: 262 ILVTTSISTLMYLLIVEFLIARYVHMIMGTYLGLIIGYGMLWMTSCDYVNRFYYAMDNAS 321
# Query: 310 RLHKPITINMTIIPIICLIIIVVRIIR 336
I+ L+ ++VR++R
# Sbjct: 322 SLRAACHGVLAVFTILILLGMIVRLVR 348
# >gi|9629865|ref|NP_| (NC_001847) glycoprotein M [Bovine herpesvirus 1]
Length = 438
Score = 70.1 bits (170), Expect = 6e-13
Identities = 74/327 (22%), Positives = 137/327 (41%), Gaps = 31/327 (9%)
# Query: 29
LALLTLLFVTSSTVPILASFRGVGFPCYFVNLVDYSTLNLTVRNSA--------KHLTPT 80
# Sbjct: 25
LALLLLITLIGAASP------GAGLPCFYAAIVNYNARNLSADGGAWAQRELGARH--PA 76
# Query: 81
LFLEGPEMFVYIVWSFLTEAINIIYFIFGAVTVYRLKKIFMPSLNAIQVWLTLIGGHSTL 140
# Sbjct: 77
LFLETPTTAAFSAYTAVVLLAVAAFDVAAAIIIRRENSGGFAAAYHMNALATLATPPGAL 136
# Query: 141 YLSIARLWTLQLFVHVLSFKQIFLAAFVYLFHFMLSYVHVHVFISRYVPQWQANDMEQKI 200
V +LS K + LAA
# Sbjct: 137 LLGALAAWTLQAAVLLLSHKIMVLAAATYLAHLAPPAAFVGLFCTAGLPGAEYAQAVHAL 196
# Query: 201 PEGS-SLEKLVLFYRPILANIQMSLLALEMLVFSLSVMMAVCNSFYILVSDAVFGAVNLF 259
# Sbjct: 197 RERSPRAHRLLGPGRAVMINLAGGLLALIIGTAPLMLGQLLGAGLGLSLAQTVVAGVTVF 256
# Query: 260 LIISLVWHIGAEVFLAKYLRHHVGFYIGLFVA----------YVIMLLPVIRYDAIFVTS 309
# Sbjct: 257 CLAAVLFLVLTELVLSRYTQVLPGPAFGTLVAASCIAVASHDYFHQLRGVVRTQAPRAAA 316
# Query: 310 RLHKPITINMTIIPIICLIIIVVRIIR 336
+ ++ + ++V+R++R
# Sbjct: 317 R----VKLALAGVALLAVAMLVLRLVR 339
# >gi|9629279|ref|NP_| (NC_001798) virion glycoprotein M [human herpesvirus 2]
Length = 467
Score = 45.1 bits (105), Expect = 2e-05
Identities = 60/262 (22%), Positives = 101/262 (37%), Gaps = 9/262 (3%)
# Query: 44
ILASFRGVGFPCYFVNLVDYSTLNLTVRNSAKHLTPTLFLEGPEMFVYIVWSFLTEAINI 103
# Sbjct: 48
VLASVFRDRFPCLYAPATSYAKANATVEVRGGVAVPLRLDTQSLLATYAITSTLLLAA-A 106
# Query: 104 IYFIFGAVTVYRLKKIFMPSLNAIQVWLTLIGGHSTLYLSIARLWTLQLFVHVLSFKQIF 163
W LQ+ V +L+ +
# Sbjct: 107 VYAAVGAVTS-RYERALDAARRLAAARMAM--PHATLIAGNVCAWLLQITVLLLAHRISQ 163
# Query: 164 LAAFVYLFHF-MLSYVHVHVFISRYVPQWQANDMEQKIPEGSSLEKLVLFYRPILANIQM 222
# Sbjct: 164 LAHLIYVLHFACLVYLAAHFCTRGVLSGTYLRQVHGLIDPAPTHHRIVGPVRAVMTNALL 223
# Query: 223 --SLLALEMLVFSLSVMMAVCNSFYILVSDAVFGAVNLFLIISLVWHIGAEVFLAKYLRH 280
# Sbjct: 224 LGTLLCTAAAAVSLNTIAAL--NFNFSAPSMLICLTTLFALLVVSLLLVVEGVLCHYVRV 281
# Query: 281 HVGFYIGLFVAYVIMLLPVIRY 302
# Sbjct: 282 LVGPHLGAIAATGIVGLACEHY 303
# >gi|9629390|ref|NP_| (NC_001806) virion glycoprotein M [human herpesvirus 1]
Length = 473
Score = 43.5 bits (101), Expect = 6e-05
Identities = 60/279 (21%), Positives = 106/279 (37%), Gaps = 5/279 (1%)
# Query: 25
WTNLLALLTLLFVTSSTVPILASFRGVGFPCYFVNLVDYSTLNLTVRNSAKHLTPTLFLE 84
# Sbjct: 29
WCVQVATFVVSAVCVTGLLVLASVFRARFPCFYATASSYAGVNSTAEVRGGVAVPLRLDT 88
# Query: 85
GPEMFVYIVWSFLTEAINIIYFIFGAVTVYRLKKIFMPSLNAIQVWLTLIGGHSTLYLSI 144
# Sbjct: 89
QSLVGTYVITAVLLLAV-AVYAVVGAVTS-RYDRALDAGRRLAAARMAM--PHATLIAGN 144
# Query: 145 ARLWTLQLFVHVLSFKQIFLAAFVYLFHF-MLSYVHVHVFISRYVPQWQANDMEQKIPEG 203
W LQ+ V +L+ +
# Sbjct: 145 VCSWLLQITVLLLAHRISQLAHLVYVLHFACLVYFAAHFCTRGVLSGTYLRQVHGLMELA 204
# Query: 204 SSLEKLVLFYRPILANIQMSLLALEMLVFSLSVMMAVCNSFYILVSDAVFGAVNLFLIIS 263
# Sbjct: 205 PTHHRVVGPARAVLTNALLLGVFLCTADAAVSLNTIAAFNFNFSAPGMLICLTVLFAILV 264
# Query: 264 LVWHIGAEVFLAKYLRHHVGFYIGLFVAYVIMLLPVIRY 302
# Sbjct: 265 VSLLLVVEGVLCHYVRVLVGPHLGAVAATGIVGLACEHY 303
# >gi||ref|NP_| (NC_003027) LSDV128 CD47-like protein [lumpy skin disease virus]
Length = 300
Score = 33.1 bits (74), Expect = 0.079
Identities = 33/142 (23%), Positives = 63/142 (44%), Gaps = 14/142 (9%)
# Query: 95
SFLTEAINIIYFIFG-AVTVYRLKKIFMPSLNAIQVWLTLIGGHSTLYLSIARLWTLQLF 153
# Sbjct: 151 SFKKDKIIYLYYYIGFVITLIMLLGQYMIGLNTNNIFIRILGT-SFIQVSIFISIILQII 209
# Query: 154 VHVLSFKQIFLAAFVYLFHFMLSYVHVHVFISRYVPQWQANDMEQKIPEGSSLEKLVLFY 213
# Sbjct: 210 FFKKKFKNTLSLITVFLLHFISYIISLIMFTMSLIGCY--NEIYGK----------VIVY 257
# Query: 214 RPILANIQMSLLALEMLVFSLS 235
# Sbjct: 258 KLLLVIIFEFISLLSLFIFSLN 279
# >gi|9634611|ref|NP_| (NC_002171) start codon is not identified [Human papillomavirus
Length = 98
Score = 32.7 bits (73), Expect = 0.10
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
# Query: 224 LLALEMLVFSLSVMMAVCNSFYILVSDAVFGAVNLFLIISLVWHIGAEVFLAKYLRHHVG 283
# Sbjct: 21
LLLVIVFVLCVCVCLLLCRLLPLLLSIHVFAAH--LLIIICFWFVVSTSFTATFFVYICL 78
# Query: 284 FYIGLFVA--YVIMLLP 298
# Sbjct: 79
FYIPAFLLHFYAVILLP 95
# >gi||ref|NP_| (NC_003225) wsv484 [shrimp white spot syndrome virus]
Length = 216
Score = 31.2 bits (69), Expect = 0.30
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
# Query: 12
LEPSRSDSFLLKSWTNLLALLTLLFVTSSTVPILASFRGVGFPCYFVNLVDYSTL-NLTV 70
S S SF+++S+++
# Sbjct: 119 LSNSSSMSFIIRSFSSRRASNSLLLLSISANIVRLSSGSRGIPCSLRYLTLSSILRNFSV 178
# Query: 71
RNSAKHLT 78
# Sbjct: 179 SSSTKHLS 186
# >gi|9630097|ref|NP_| (NC_001876) DNA polymerase [Bovine adenovirus B]
Length = 1023
Score = 31.2 bits (69), Expect = 0.30
Identities = 17/43 (39%), Positives = 22/43 (50%)
# Query: 107 IFGAVTVYRLKKIFMPSLNAIQVWLTLIGGHSTLYLSIARLWT 149
+Y LK I+ PS
# Sbjct: 899 VFLAPKLYALKNIYCPSCRRREFWQTSSKGHATSQLSYDLLVT 941
# >gi|9964444|ref|NP_| (NC_002520) putative ATP-binding cassette transporter [Amsacta
moorei entomopoxvirus]
Length = 1384
Score = 31.2 bits (69), Expect = 0.30
Identities = 36/232 (15%), Positives = 108/232 (46%), Gaps = 32/232 (13%)
# Query: 57
FVNLVDYSTLNLTVRNSAKHLTPTL-FLEGPEMFVYIVWSFLTEAINIIYFIFGAVTVYR 115
++ P++ +YI
IIY +FG + +
# Sbjct: 178 YYSILIIAFISFILKNNNDNNDPMFKIIKVPKILIYISNFICSIPFGIIYSVFGTIILTI 237
# Query: 116 LKKIFMPSLNAIQVWLTLIGGHSTLYLSIARLWTLQLFVHVLSFK-QIFLAAFVY----- 169
+ + N I ++L L+
+L +K +IF+
# Sbjct: 238 SEDPLINNNNNIIMFLILL----IYFISVISMAYLCNFFILLIYKYKIFVIMCVYVLTII 293
# Query: 170 ---LFHFMLSYVHVHVFISRYVPQWQANDMEQKIPEGSSLEKLVLFYRPILANIQMSLLA 226
L++ + S +++ + +
# Sbjct: 294 PITLYNNLNSDINIFIGLIPHIPLYWIFDQLNYVEKQNK-------------SLTFNNIN 340
# Query: 227 LEMLVFSLSVMMAVCNSFYILVSDAVFGAVNLFLIISLVWHIGAEVFLAKYL 278
++S S+++++
# Sbjct: 341 ISYSIYSKSILISI---IYLILQSFIY--ISIIHIIKLIYKICKKYMKMKYI 387
# >gi||ref|NP_| (NC_004002) CD47-like protein [Sheeppox virus] [sheeppox virus]
Length = 301
Score = 30.8 bits (68), Expect = 0.39
Identities = 31/135 (22%), Positives = 59/135 (42%), Gaps = 13/135 (9%)
# Query: 101 INIIYFIFGAVTVYRLKKIFMPSLNAIQVWLTLIGGHSTLYLSIARLWTLQLFVHVLSFK 160
# Sbjct: 159 IYLYYYIGFVITLIMLLGQYMIGLNTNNIFIRILGT-SFIQVSIFISIILQIIFFKKKFK 217
# Query: 161 QIFLAAFVYLFHFMLSYVHVHVFISRYVPQWQANDMEQKIPEGSSLEKLVLFYRPILANI 220
# Sbjct: 218 NTLSLITVFLLHFISYIISLIMFTMSLIGCY--NEIYGK----------VIVYKLSLVII 265
# Query: 221 QMSLLALEMLVFSLS 235
# Sbjct: 266 FEFISLLSLFIFSLN 280
# >gi|9634852|ref|NP_| (NC_002188) ORF FPV182 Phosphorylated virion membrane protein
[Fowlpox virus]
Length = 198
Score = 29.3 bits (64), Expect = 1.1
Identities = 34/123 (27%), Positives = 56/123 (44%), Gaps = 19/123 (15%)
# Query: 223 SLLALEMLVFSLSVMMAVCNSFYILVSDAVFGAVNLFLI---ISLVWHIGAEVFLAKYLR 279
SLLAL MLVF+++
# Sbjct: 64
SLLALIMLVFAINTNSLVALIFIIL--SAIFVPVPALIIAYCIALHLKNGSDA------- 114
# Query: 280 HHVGFYIGLFVAYVIMLLPVIRYDAIFVTSRLHKPITINMTIIPIICLIIIVVRIIRLRS 339
# Sbjct: 115 THVGISILLMLASAVTIY-------LTSTSKISKGFKRAIDVVLLVILGFYIVKIYGIDR 167
# Query: 340 QTS 342
# Sbjct: 168 QIS 170
# >gi|9634774|ref|NP_| (NC_002188) ORF FPV104 hypothetical protein [Fowlpox virus]
Length = 210
Score = 28.9 bits (63), Expect = 1.5
Identities = 19/66 (28%), Positives = 35/66 (52%), Gaps = 5/66 (7%)
# Query: 192 QANDMEQKIPEGSSLEKLVLFYRPILANIQMSLLALEMLVFSLSVMMAVCNSFYILVSDA 251
# Sbjct: 49
QVKDIVKKTYNQTYLQLLQLLER---SNVDCN--ELELLYRIININPRICHRFYINRYDS 103
# Query: 252 VFGAVN 257
# Sbjct: 104 IFGSFN 109
# >gi|9631704|ref|NP_| (NC_000852) A135L [Paramecium bursaria Chlorella virus 1]
Length = 182
Score = 28.5 bits (62), Expect = 1.9
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 12/98 (12%)
# Query: 22
LKSWTNLLALLTLLFVTSSTVPILASFRGVGFPCYFVNLVDYSTLNLTVRNSAKHLTPTL 81
I +SF G+ F
VNL+D+ +L +
# Sbjct: 87
LASFTRFLAMASALIFFRC---IASSFAGICFLVMGVNLIDFPSLFI-------YLTDAI 136
# Query: 82
FLEGPEMFVYIVWSFLTEAINIIYFIFGAVTVYRLKKI 119
# Sbjct: 137 GF--PEAFENVTLFFTTFFTGAIAHTGYIITVYFFKNL 172
# >gi||ref|NP_| (NC_003521) US2 [chimpanzee cytomegalovirus]
Length = 203
Score = 28.1 bits (61), Expect = 2.5
Identities = 15/46 (32%), Positives = 22/46 (47%)
# Query: 124 LNAIQVWLTLIGGHSTLYLSIARLWTLQLFVHVLSFKQIFLAAFVY 169
Y S A +W +Q
# Sbjct: 128 LNGDVVWLTCVPEIRVDYTSNAYMWNMQYGMVHRSYRHVALAVLFY 173
# >gi||ref|NP_| (NC_003401) unknown [Macaca mulatta rhadinovirus]
Length = 348
Score = 27.7 bits (60), Expect = 3.3
Identities = 15/35 (42%), Positives = 21/35 (59%), Gaps = 5/35 (14%)
# Query: 51 VGFPCYFVNLVDYSTLNLTVRNSAKHLTPTLFLEG 85
Y T++ TVR+
# Sbjct: 56 VACPCYRLHIPAYITIDETVRS-----TTNLFLEG 85
# >gi|9631432|ref|NP_| (NC_001993) ORF MSV233 hypothetical protein [Melanoplus sanguinipes
entomopoxvirus]
Length = 92
Score = 27.3 bits (59), Expect = 4.3
Identities = 12/54 (22%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
# Query: 132 TLIGGHSTLYLSIARLWTLQLFVHVLSFKQIFLAAFVYLFHFMLSYVHVHVFIS 185
# Sbjct: 10
TFIFIHTFIFIIIFMFTFIFIIIIIFMFTFIFIIIIIFMFTFI--FIHTFIFIT 61
# >gi||ref|NP_| (NC_003529) occlusion-derived virus envelope protein ODV-E66
[Mamestra configurata nucleopolyhedrovirus]
Length = 672
Score = 26.9 bits (58), Expect = 5.6
Identities = 12/37 (32%), Positives = 22/37 (59%)
# Query: 285 YIGLFVAYVIMLLPVIRYDAIFVTSRLHKPITINMTI 321
YI + VA+VI +L +I
# Sbjct: 4
YIFIIVAFVIFVLILIWQTDVFIATNALNPLIINVDL 40
# >gi|9964479|ref|NP_| (NC_002520) Hypothetical protein [Amsacta moorei entomopoxvirus]
Length = 325
Score = 26.6 bits (57), Expect = 7.4
Identities = 31/135 (22%), Positives = 61/135 (44%), Gaps = 12/135 (8%)
# Query: 207 EKLVLFYRPILANIQMSLLALEMLVFSLSVMMAVCNSFYI-LVSDAVFGAVNLFLIISLV 265
# Sbjct: 173 KKITKFYNNYDFMITICMFIINCIILPLIVISDACESFKIDYINSLICGTYLVYTILSII 232
# Query: 266 WHIGAEVFLAK----YLRHHVGFYIGLFVAYVIMLLPVIRYDAIFVTS-RLHKPITINMT 320
# Sbjct: 233 ------IILKRKPRCIIRKIIIICIISIQLFIIILSSMVFSIEIFDTNERCSKILTTVII 286
# Query: 321 IIPIICLIIIVVRII 335
# Sbjct: 287 LIVIINLIWSFVKNI 301
# >gi||ref|NP_| (NC_004002) G protein-coupled chemokine receptor [Sheeppox virus]
[sheeppox virus]
Length = 374
Score = 26.6 bits (57), Expect = 7.4
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
# Query: 246 ILVSDAVFGAV---NLFLIISLVWHIGAEVFLAKYLRHHVGFYIGLFVAYVIMLLPVIRY 302
K + + VGFY
# Sbjct: 125 LTLSDLIFVLVFPFNLYNSIAKQWSLGDCLCKFKAMFYFVGFYNSM---SFITLMSIDRY 181
# Query: 303 DAIFVTSRLHKPITINMTIIPII-CLIIIVVRII 335
# Sbjct: 182 LAIVYPV---KSITIRTKQYGIVLSMVVWIVSII 212
# >gi|9631502|ref|NP_| (NC_001993) ORF MSV067 putative mRNA capping enzyme large subunit
homolog (vaccinia D1R), similar to SW:P20979 [Melanoplus
sanguinipes entomopoxvirus]
Length = 860
Score = 26.6 bits (57), Expect = 7.4
Identities = 14/69 (20%), Positives = 31/69 (44%)
# Query: 184 ISRYVPQWQANDMEQKIPEGSSLEKLVLFYRPILANIQMSLLALEMLVFSLSVMMAVCNS 243
# Sbjct: 88
IQKLTNQWTIKKLINKIEENIGNEKFIIAHNTEEDNIKNNMIIPPKKLIMSNVTIHILSS 147
# Query: 244 FYILVSDAV 252
# Sbjct: 148 IYFIINGNV 156
# >gi|9964458|ref|NP_| (NC_002520) Hypothetical protein [Amsacta moorei entomopoxvirus]
Length = 115
Score = 26.2 bits (56), Expect = 9.6
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 6/53 (11%)
# Query: 285 YIGLFVAYVIMLLPVIRYDAIFVTSRLHKPITINMTIIPIICLIIIVVRIIRL 337
++ LI+I++ II +
# Sbjct: 37
FLVLFILISLILILVFKYVNII------KNVLIILTIFYVVILIVILIFIISI 83
Subset of the database(s) listed below
Number of letters searched: 3,586,242
Number of sequences searched:
Database: dsDNA virus proteins
Posted date:
Number of letters in database: 3,586,242
Number of sequences in database:
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,537,781
Number of Sequences: 11439
Number of extensions: 102255
Number of successful extensions: 403
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 314
Number of HSP's gapped (non-prelim): 51
length of query: 383
length of database: 3,586,242
effective HSP length: 93
effective length of query: 290
effective length of database: 2,522,415
effective search space:
effective search space used:
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 56 (26.2 bits)
S2: 56 (26.2 bits)